MLOC_31320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains393.302378.926371.301423.744
LEAShoots from the seedlings (10 cm shoot stage)158.212137.848125.901137.188
INF1Young developing inflorescences (5mm)443.601535.896523.544450.587
INF2Developing inflorescences (1-1.5 cm)273.449294.086253.788323.6
ROORoots from the seedlings (10 cm shoot stage)331.134325.456285.939448.598
NODDeveloping tillers at six leaf stage, 3rd internode181.061200.9194.85801.244
CAR5Developing grain, bracts removed (5 DPA)280.445282.523289.439294.232
CAR15Developing grain, bracts removed (15 DPA)179.333167.061148.446394.147



CDS Structure of MLOC_31320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354060
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354060CUST_19310_PI427708080NoneNoneNone
MLOC_19856.1NoneAvailableNonecontig_1586839 (Not mapped)
MLOC_21305.1NoneAvailableNonecontig_1594168 (Mapped)
MLOC_31320.1NoneAvailableAvailablecontig_217864 (Mapped)
MLOC_35124.1NoneAvailableNonecontig_245718 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----