MLOC_31261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.81144.471476.925736.95386
LEAShoots from the seedlings (10 cm shoot stage)3.181841.69627.302093.11044
INF1Young developing inflorescences (5mm)11.129112.34921.735510.4474
INF2Developing inflorescences (1-1.5 cm)12.1783.658995.176757.25805
ROORoots from the seedlings (10 cm shoot stage)8.8761910.62496.1105710.2092
NODDeveloping tillers at six leaf stage, 3rd internode0.7970991.320173.253394.86249
CAR5Developing grain, bracts removed (5 DPA)4.389986.215312.842634.09384
CAR15Developing grain, bracts removed (15 DPA)02.771661.314654.49393



CDS Structure of MLOC_31261






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31261.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31261.1CUST_4437_PI427708083AvailableAvailablecontig_21718 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51400.1 +2 3e-23 94 48/53 (91%) 13102.m05841 protein AAA family ATPase, putative, expressed
TAIR PP10 AT1G50140.2 +2 8e-21 86 43/53 (81%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:18569921-18578663 REVERSE LENGTH=981