MLOC_3120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.980023.900064.018714.30496
LEAShoots from the seedlings (10 cm shoot stage)1.089290.2055420.1880970.431282
INF1Young developing inflorescences (5mm)5.318694.995914.73814.87782
INF2Developing inflorescences (1-1.5 cm)4.252276.53733.853076.73954
ROORoots from the seedlings (10 cm shoot stage)1.680662.170123.073593.04155
NODDeveloping tillers at six leaf stage, 3rd internode0.2058160.3411780.2962451.21444
CAR5Developing grain, bracts removed (5 DPA)1.474052.207371.151392.00012
CAR15Developing grain, bracts removed (15 DPA)0.1777960.1477290.1939660.535959



CDS Structure of MLOC_3120






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3120.1CUST_4431_PI427708083AvailableAvailablecontig_127935 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g31930.1 -3 8e-40 144 89/162 (55%) 13110.m02790 protein shugoshin-1, putative, expressed
TAIR PP10None-----