MLOC_3119 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.156411.727772.307912.31278
LEAShoots from the seedlings (10 cm shoot stage)0.6279710.1616020.4606370.365829
INF1Young developing inflorescences (5mm)2.023682.231912.002221.88828
INF2Developing inflorescences (1-1.5 cm)2.299393.069982.807523.2294
ROORoots from the seedlings (10 cm shoot stage)1.12571.13972.099231.62828
NODDeveloping tillers at six leaf stage, 3rd internode0.4052490.4987440.2364551.4679
CAR5Developing grain, bracts removed (5 DPA)0.954071.26630.6009811.01013
CAR15Developing grain, bracts removed (15 DPA)0.2079240.1513620.3078460.54182



CDS Structure of MLOC_3119






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3119.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3119.1CUST_4429_PI427708083AvailableAvailablecontig_127935 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g31930.1 -2 1e-18 84 68/111 (61%) 13110.m02790 protein shugoshin-1, putative, expressed
TAIR PP10None-----