MLOC_31188 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.3109821.400150.762223
LEAShoots from the seedlings (10 cm shoot stage)0.54801600.9728420.651518
INF1Young developing inflorescences (5mm)0.2977890.3045920.370780.241073
INF2Developing inflorescences (1-1.5 cm)0.4563460.8454121.23240.990803
ROORoots from the seedlings (10 cm shoot stage)00.34272500.452234
NODDeveloping tillers at six leaf stage, 3rd internode00.2344951.494191.93867
CAR5Developing grain, bracts removed (5 DPA)0.2895160.2641081.270010.579399
CAR15Developing grain, bracts removed (15 DPA)0.2968370.31304901.23063



CDS Structure of MLOC_31188






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31188.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31188.1CUST_4428_PI427708083AvailableAvailablecontig_216547 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34170.3 +3 4e-27 103 53/61 (87%) 13105.m03548 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G23860.2 +3 2e-27 103 53/61 (87%) | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449