- Predicted Gene MLOC_31149
MLOC_31149 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 1.35388 | 1.47241 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.07087 | 0.552611 | 0.96036 | 1.46608 |
INF1 | Young developing inflorescences (5mm) | 1.43586 | 3.88348 | 2.20945 | 3.92537 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.27028 | 4.70702 | 4.83366 | 11.9011 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.508259 | 1.55666 | 0.763937 | 11.3498 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.0324 | 0.518101 | 0.30392 | 1.85987 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.824959 | 0.296629 | 0.418188 | 1.7957 |
CDS Structure of MLOC_31149
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_31149.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g39940.1 |
-1 |
9e-25 |
96 |
45/62 (73%) |
13107.m04148 protein helix-loop-helix DNA-binding domain containing protein |
TAIR PP10 |
AT2G14760.1 |
-1 |
8e-25 |
95 |
45/62 (73%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:6321840-6323312 REVERSE LENGTH=328 |