MLOC_31146 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.7838080.4527723.62061.31077
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.317930.5761851.796491.02276
NODDeveloping tillers at six leaf stage, 3rd internode0.09093540.039655500.160414
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_31146






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31146.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31146.1CUST_4423_PI427708083AvailableAvailablecontig_2161547 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 -3 3e-94 287 152/166 (92%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT2G20340.1 -3 4e-52 176 91/166 (55%) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490