MLOC_31018 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.603318.22669.761727.01965
LEAShoots from the seedlings (10 cm shoot stage)78.738199.4298104.98472.0701
INF1Young developing inflorescences (5mm)10.59215.565256.421395.7382
INF2Developing inflorescences (1-1.5 cm)6.206254.972195.199755.25211
ROORoots from the seedlings (10 cm shoot stage)01.011782.462961.48814
NODDeveloping tillers at six leaf stage, 3rd internode8.130945.302535.6546316.0187
CAR5Developing grain, bracts removed (5 DPA)13.613213.63716.730811.7281
CAR15Developing grain, bracts removed (15 DPA)2.187891.617141.807173.84304



CDS Structure of MLOC_31018






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31018.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31018.1CUST_4405_PI427708083AvailableAvailablecontig_2149544 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g18450.1 +3 1e-33 129 62/71 (87%) 13102.m02069 protein GTP-binding protein typA/bipA, putative, expressed
TAIR PP10 AT5G13650.1 +3 2e-28 113 54/76 (71%) elongation factor family protein | chr5:4397821-4402364 FORWARD LENGTH=675