- Predicted Gene MLOC_30949
MLOC_30949 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.03269 | 1.90233 | 0 | 2.77239 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.91156 | 0 | 4.6834 | 5.84234 |
| INF1 | Young developing inflorescences (5mm) | 0.770243 | 0.836445 | 3.84909 | 1.8403 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.86 | 1.98201 | 0.90189 | 3.13757 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.46908 | 2.06106 | 8.23996 | 3.927 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.29323 | 6.60656 | 8.33969 | 27.6105 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.60557 | 2.44599 | 2.64991 | 3.7386 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.19578 | 2.45167 | 0 | 9.09395 |
CDS Structure of MLOC_30949
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30949.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05280.1 |
+3 |
9e-19 |
79 |
37/45 (82%) |
13105.m00547 protein zinc finger family protein, putative, expressed |
| TAIR PP10 |
AT3G47990.1 |
+3 |
3e-16 |
71 |
30/35 (86%) |
| Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358 |