- Predicted Gene MLOC_30915
MLOC_30915 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 57.0146 | 56.1306 | 64.0338 | 63.9126 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.0785 | 30.807 | 33.2407 | 30.2419 |
INF1 | Young developing inflorescences (5mm) | 71.9402 | 73.2669 | 67.8694 | 67.9177 |
INF2 | Developing inflorescences (1-1.5 cm) | 48.017 | 56.0084 | 57.6613 | 65.7526 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.1127 | 51.4315 | 52.6818 | 63.6596 |
NOD | Developing tillers at six leaf stage, 3rd internode | 34.8414 | 30.8125 | 23.9753 | 90.6282 |
CAR5 | Developing grain, bracts removed (5 DPA) | 63.549 | 68.3454 | 68.8456 | 74.8463 |
CAR15 | Developing grain, bracts removed (15 DPA) | 27.0133 | 23.0274 | 20.1414 | 65.0489 |
CDS Structure of MLOC_30915
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30915.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21970.1 |
-3 |
3e-140 |
403 |
203/207 (98%) |
13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed |
TAIR PP10 |
AT5G58290.1 |
-3 |
9e-134 |
385 |
194/207 (94%) |
| Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408 |