MLOC_309 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_309_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_309_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.97199 | 5.11772 | 4.53151 | 5.13719 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.15715 | 2.20243 | 2.97149 | 2.99698 |
INF1 | Young developing inflorescences (5mm) | 10.8112 | 10.2197 | 11.9492 | 10.4614 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.4131 | 16.9082 | 16.1751 | 20.2698 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.059 | 5.73801 | 5.10249 | 6.75565 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.32096 | 1.93545 | 2.26913 | 6.63069 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.96704 | 8.8686 | 8.529 | 9.61022 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.49016 | 4.8392 | 4.63846 | 12.6354 |
CDS Structure of MLOC_309
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_309.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52750.2 |
+3 |
1e-35 |
129 |
61/82 (74%) |
13103.m05753 protein cyclin, putative, expressed |
TAIR PP10 |
AT5G27620.1 |
+3 |
3e-15 |
70 |
35/81 (43%) |
| Symbols: CYCH;1 | cyclin H;1 | chr5:9771762-9774684 FORWARD LENGTH=336 |