MLOC_30872 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.01589.1992610.139610.2696
LEAShoots from the seedlings (10 cm shoot stage)7.9656810.069512.72438.13287
INF1Young developing inflorescences (5mm)6.782949.295118.224566.24953
INF2Developing inflorescences (1-1.5 cm)7.040755.435545.526896.89402
ROORoots from the seedlings (10 cm shoot stage)17.561411.865314.66416.1645
NODDeveloping tillers at six leaf stage, 3rd internode14.202319.938423.948867.1571
CAR5Developing grain, bracts removed (5 DPA)7.527388.005767.212847.80096
CAR15Developing grain, bracts removed (15 DPA)2.278123.131943.363786.4152



CDS Structure of MLOC_30872






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357563
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357563CUST_19830_PI427708080NoneNoneNone
MLOC_26135.1NoneAvailableNonecontig_173789 (Mapped)
MLOC_30872.1NoneAvailableAvailablecontig_213513 (Mapped)
MLOC_46140.1NoneAvailableNonecontig_286037 (Not mapped)
MLOC_46679.1NoneAvailableNonecontig_29415 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----