MLOC_3087 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_3087_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_3087_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.9812 | 4.97402 | 5.16083 | 4.09572 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.46431 | 6.0887 | 11.3265 | 6.09243 |
INF1 | Young developing inflorescences (5mm) | 0.915725 | 1.23685 | 1.0737 | 0.799776 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.552534 | 0.893919 | 0.846761 | 0.761361 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.78526 | 9.42958 | 8.06459 | 10.1189 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.838151 | 0.994668 | 1.54311 | 3.22558 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.827098 | 0.823505 | 0.622548 | 0.695763 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.323935 | 0.278266 | 0.3561 | 0.640809 |
CDS Structure of MLOC_3087
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3087.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g32370.1 |
-1 |
0.0 |
883 |
506/633 (80%) |
13104.m03100 protein hydroxyproline-rich glycoprotein family protein, putative, expressed |
TAIR PP10 |
AT2G33490.1 |
-1 |
1e-121 |
382 |
274/652 (42%) |
hydroxyproline-rich glycoprotein family protein | chr2:14183552-14187666 FORWARD LENGTH=623 |