MLOC_30854 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.194883.707832.296783.49627
LEAShoots from the seedlings (10 cm shoot stage)4.29113.325827.557944.22762
INF1Young developing inflorescences (5mm)23.282124.766326.170620.9033
INF2Developing inflorescences (1-1.5 cm)22.450623.168224.756725.4388
ROORoots from the seedlings (10 cm shoot stage)8.670385.383224.485126.65626
NODDeveloping tillers at six leaf stage, 3rd internode2.109483.451365.2447511.136
CAR5Developing grain, bracts removed (5 DPA)7.357118.545357.33447.54392
CAR15Developing grain, bracts removed (15 DPA)1.83962.48991.789454.88454



CDS Structure of MLOC_30854






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369953
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369953CUST_25395_PI427708080NoneNoneNone
MLOC_30854.1NoneAvailableAvailablecontig_213310 (Mapped)
MLOC_49759.1NoneAvailableNonecontig_347828 (Not mapped)
MLOC_53164.1NoneAvailableNonecontig_381056 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----