MLOC_30834 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.50112.904813.06340
LEAShoots from the seedlings (10 cm shoot stage)13.51579.4061310.08370
INF1Young developing inflorescences (5mm)25.278826.35928.32190
INF2Developing inflorescences (1-1.5 cm)21.362720.054615.78660
ROORoots from the seedlings (10 cm shoot stage)9.14859.17748.787650
NODDeveloping tillers at six leaf stage, 3rd internode9.7078210.380612.92930
CAR5Developing grain, bracts removed (5 DPA)16.133913.701720.27180
CAR15Developing grain, bracts removed (15 DPA)5.063598.816545.956510



CDS Structure of MLOC_30834






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372981
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372981CUST_25700_PI427708080NoneNoneNone
MLOC_27017.2NoneAvailableNonecontig_179813 (Mapped)
MLOC_30834.2NoneAvailableNonecontig_2131226 (Not mapped)
MLOC_35437.1NoneAvailableNonecontig_248500 (Mapped)
MLOC_41464.1NoneAvailableNonecontig_2589432 (Mapped)
MLOC_46635.1NoneAvailableAvailablecontig_293496 (Not mapped)
MLOC_67335.1NoneAvailableNonecontig_52913 (Mapped)
MLOC_72408.1NoneAvailableNonecontig_615881 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----