MLOC_30821 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.482730.043225.284419.8995
LEAShoots from the seedlings (10 cm shoot stage)19.380815.2312.267410.6873
INF1Young developing inflorescences (5mm)21.711822.369421.079815.3844
INF2Developing inflorescences (1-1.5 cm)33.809827.481629.405727.9029
ROORoots from the seedlings (10 cm shoot stage)17.464625.517431.149221.1682
NODDeveloping tillers at six leaf stage, 3rd internode19.83213.943249.0723211.413
CAR5Developing grain, bracts removed (5 DPA)38.843346.699439.976132.9874
CAR15Developing grain, bracts removed (15 DPA)20.077317.295715.556838.1618



CDS Structure of MLOC_30821






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30821.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30821.1NoneAvailableAvailablecontig_212963 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g43470.2 -2 3e-32 125 60/69 (87%) 13108.m04709 protein ER lumen protein retaining receptor, putative, expressed
TAIR PP10 AT4G38790.1 -2 5e-31 121 58/69 (84%) ER lumen protein retaining receptor family protein | chr4:18111426-18112977 FORWARD LENGTH=273