- Predicted Gene MLOC_30818
MLOC_30818 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.8608 | 34.1114 | 29.1748 | 20.1067 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.4293 | 22.8522 | 24.7396 | 19.5462 |
| INF1 | Young developing inflorescences (5mm) | 30.1213 | 31.2509 | 31.9531 | 18.6556 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.8783 | 38.0815 | 27.9697 | 30.9674 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.6996 | 20.8977 | 23.2143 | 18.3591 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 29.6023 | 18.8734 | 22.6696 | 58.386 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.8282 | 26.1476 | 21.2227 | 17.1299 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.5682 | 10.4158 | 11.8841 | 17.7609 |
CDS Structure of MLOC_30818
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30818.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g42750.2 |
-2 |
2e-36 |
137 |
74/89 (83%) |
13103.m04595 protein roothairless 1, putative, expressed |
| TAIR PP10 |
AT1G47560.1 |
-2 |
4e-22 |
96 |
50/87 (57%) |
| Symbols: SEC3B | exocyst complex component sec3B | chr1:17466751-17473190 FORWARD LENGTH=887 |