MLOC_30800 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.260510.78210.99913.8552
LEAShoots from the seedlings (10 cm shoot stage)6.938146.520217.285766.68226
INF1Young developing inflorescences (5mm)16.584214.594614.175715.4483
INF2Developing inflorescences (1-1.5 cm)15.077915.634516.692421.094
ROORoots from the seedlings (10 cm shoot stage)16.448212.22915.528619.2868
NODDeveloping tillers at six leaf stage, 3rd internode1.328382.03475.528319.48223
CAR5Developing grain, bracts removed (5 DPA)14.309916.498114.379919.078
CAR15Developing grain, bracts removed (15 DPA)3.348173.475462.263629.07983



CDS Structure of MLOC_30800






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30800.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373526NoneNoneNoneNone
MLOC_30800.1CUST_2114_PI427708080AvailableAvailablecontig_212775 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g22950.1 -1 2e-96 291 148/167 (89%) 13107.m02251 protein adenylate kinase isoenzyme 6, putative, expressed
TAIR PP10 AT5G60340.1 -1 2e-67 215 108/165 (65%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24275098-24275891 REVERSE LENGTH=178