MLOC_3080 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.125560.9873611.054150.822047
LEAShoots from the seedlings (10 cm shoot stage)1.615650.6291880.6697460.792862
INF1Young developing inflorescences (5mm)0.5333490.5805020.5112630.381405
INF2Developing inflorescences (1-1.5 cm)0.7117860.4578580.7054180.649058
ROORoots from the seedlings (10 cm shoot stage)1.067671.278750.764131.06838
NODDeveloping tillers at six leaf stage, 3rd internode0.8613131.278881.492143.39016
CAR5Developing grain, bracts removed (5 DPA)0.9999851.133891.330120.819039
CAR15Developing grain, bracts removed (15 DPA)2.17872.10042.356473.6776



CDS Structure of MLOC_3080






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3080.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3080.2CUST_12027_PI427708083AvailableAvailablecontig_127690 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13130.1 +1 8e-36 118 68/126 (54%) 13102.m01454 protein KH domain-containing protein, putative, expressed
TAIR PP10None-----