MLOC_30780 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.289511.983161.513980
LEAShoots from the seedlings (10 cm shoot stage)29.092448.806643.51790
INF1Young developing inflorescences (5mm)7.430625.677033.604570
INF2Developing inflorescences (1-1.5 cm)2.977124.958051.992640
ROORoots from the seedlings (10 cm shoot stage)03.083856.525810
NODDeveloping tillers at six leaf stage, 3rd internode10.94988.3160312.38140
CAR5Developing grain, bracts removed (5 DPA)2.984273.484276.318140
CAR15Developing grain, bracts removed (15 DPA)0.999233000



CDS Structure of MLOC_30780






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249064.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249064.1CUST_18646_PI427708080NoneNoneNone
MLOC_23992.1NoneAvailableNonecontig_1633863 (Mapped)
MLOC_30780.1NoneAvailableNonecontig_2125775 (Mapped)
MLOC_32792.1NoneAvailableNonecontig_232003 (Mapped)
MLOC_6695.1NoneAvailableAvailablecontig_137934 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----