MLOC_30738 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.51980.678480.5114480
LEAShoots from the seedlings (10 cm shoot stage)3.129023.371021.785310
INF1Young developing inflorescences (5mm)1.729262.086754.085360
INF2Developing inflorescences (1-1.5 cm)1.838451.011862.382030
ROORoots from the seedlings (10 cm shoot stage)0.609260.3609770.2964140
NODDeveloping tillers at six leaf stage, 3rd internode3.664412.436222.665310
CAR5Developing grain, bracts removed (5 DPA)0.7591460.5295530.947180
CAR15Developing grain, bracts removed (15 DPA)0.5534610.7608350.5432330



CDS Structure of MLOC_30738






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK353595
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353595NoneNoneNoneNone
MLOC_1881.1NoneAvailableNonecontig_116773 (Not mapped)
MLOC_30565.1NoneAvailableNonecontig_2109607 (Mapped)
MLOC_30738.1NoneAvailableNonecontig_212252 (Mapped)
MLOC_31233.1NoneAvailableNonecontig_216934 (Not mapped)
MLOC_3306.1NoneAvailableAvailablecontig_129575 (Mapped)
MLOC_42842.1NoneAvailableNonecontig_266545 (Not mapped)
MLOC_50496.1NoneAvailableNonecontig_36088 (Not mapped)
MLOC_63520.1NoneAvailableNonecontig_476630 (Not mapped)
MLOC_74795.1NoneAvailableNonecontig_665421 (Not mapped)
MLOC_9253.1NoneAvailableNonecontig_150545 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----