MLOC_3072 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.557386.2004615.07650
LEAShoots from the seedlings (10 cm shoot stage)16.556110.54766.8890
INF1Young developing inflorescences (5mm)15.862611.640420.33810
INF2Developing inflorescences (1-1.5 cm)21.929711.774219.56170
ROORoots from the seedlings (10 cm shoot stage)1.744686.068626.273910
NODDeveloping tillers at six leaf stage, 3rd internode21.826811.956616.70850
CAR5Developing grain, bracts removed (5 DPA)2.104711.984952.701130
CAR15Developing grain, bracts removed (15 DPA)2.104432.773581.938310



CDS Structure of MLOC_3072






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370769
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370769CUST_25490_PI427708080NoneNoneNone
MLOC_302.1NoneAvailableNonecontig_10209 (Mapped)
MLOC_30432.1NoneAvailableNonecontig_2096128 (Not mapped)
MLOC_3072.1NoneAvailableNonecontig_1276281 (Not mapped)
MLOC_42611.1NoneAvailableNonecontig_2653881 (Not mapped)
MLOC_64421.3NoneAvailableAvailablecontig_48803 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----