MLOC_30711 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.588716.036515.272613.0746
LEAShoots from the seedlings (10 cm shoot stage)17.534917.520216.90413.9444
INF1Young developing inflorescences (5mm)21.390726.168726.921518.5467
INF2Developing inflorescences (1-1.5 cm)19.366124.342923.610222.6042
ROORoots from the seedlings (10 cm shoot stage)12.159817.243215.430718.119
NODDeveloping tillers at six leaf stage, 3rd internode23.123326.043930.413281.1578
CAR5Developing grain, bracts removed (5 DPA)16.946217.414319.738415.9785
CAR15Developing grain, bracts removed (15 DPA)15.391615.06616.851131.7238



CDS Structure of MLOC_30711






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30711.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365130NoneNoneNoneNone
MLOC_30711.1CUST_2110_PI427708080AvailableAvailablecontig_212054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g37480.1 +2 0.0 1110 583/726 (80%) 13110.m03399 protein STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
TAIR PP10 AT4G24100.1 +2 0.0 744 404/706 (57%) Protein kinase superfamily protein | chr4:12515223-12519336 FORWARD LENGTH=709