- Predicted Gene MLOC_30654
MLOC_30654 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.26918 | 6.29415 | 8.00854 | 5.46319 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.2699 | 12.2979 | 9.80769 | 20.3994 |
| INF1 | Young developing inflorescences (5mm) | 24.7732 | 29.2632 | 29.4138 | 24.2221 |
| INF2 | Developing inflorescences (1-1.5 cm) | 35.5083 | 33.7983 | 28.1388 | 38.8366 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.49151 | 5.83262 | 4.44998 | 7.07661 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.11822 | 10.2233 | 17.546 | 41.5309 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.241 | 13.6549 | 11.9658 | 14.0807 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.9599 | 18.4743 | 14.8797 | 46.0937 |
CDS Structure of MLOC_30654
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30654.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g23180.1 |
+3 |
6e-16 |
73 |
33/41 (80%) |
13112.m02355 protein 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed |
| TAIR PP10 |
AT1G09340.1 |
+3 |
2e-14 |
68 |
29/41 (71%) |
| Symbols: CRB, CSP41B, HIP1.3 | chloroplast RNA binding | chr1:3015473-3018035 FORWARD LENGTH=378 |