MLOC_30570 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.524212.172120.60560
LEAShoots from the seedlings (10 cm shoot stage)3.95366000
INF1Young developing inflorescences (5mm)27.19628.492223.67230
INF2Developing inflorescences (1-1.5 cm)27.961122.872421.30850
ROORoots from the seedlings (10 cm shoot stage)8.957658.198999.557480
NODDeveloping tillers at six leaf stage, 3rd internode00.071273400
CAR5Developing grain, bracts removed (5 DPA)9.621395.3782612.03420
CAR15Developing grain, bracts removed (15 DPA)0.5517620.58453600



CDS Structure of MLOC_30570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248176.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248176.1CUST_18515_PI427708080NoneNoneNone
MLOC_21235.1NoneAvailableNonecontig_1593756 (Mapped)
MLOC_30570.1NoneAvailableNonecontig_2109829 (Not mapped)
MLOC_3283.1NoneAvailableNonecontig_1294352 (Not mapped)
MLOC_47103.1NoneAvailableAvailablecontig_300674 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----