- Predicted Gene MLOC_30567
MLOC_30567 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.17395 | 0.571992 | 1.0975 | 1.15071 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.41513 | 0 | 0 | 0.371399 |
| INF1 | Young developing inflorescences (5mm) | 0.60263 | 1.17442 | 1.19306 | 0.972672 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.411942 | 0.82158 | 0.865303 | 0.881586 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.63485 | 1.5009 | 0 | 2.1619 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.184075 | 0.0844499 | 0.263228 | 0.319114 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.878553 | 1.6574 | 0.62765 | 1.28718 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.64723 | 0.249519 | 0.945312 | 1.41986 |
CDS Structure of MLOC_30567
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30567.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53950.1 |
-3 |
9e-29 |
110 |
53/73 (73%) |
13103.m05908 protein strictosidine synthase, putative, expressed |
| TAIR PP10 |
AT1G08470.1 |
-3 |
2e-18 |
81 |
35/73 (48%) |
| Symbols: SSL3 | strictosidine synthase-like 3 | chr1:2682262-2683977 REVERSE LENGTH=390 |