MLOC_30535 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.995461.862221.005350.873537
LEAShoots from the seedlings (10 cm shoot stage)1.215430.3993961.925230.673127
INF1Young developing inflorescences (5mm)1.920362.78022.71851.19364
INF2Developing inflorescences (1-1.5 cm)4.005173.433152.312182.69635
ROORoots from the seedlings (10 cm shoot stage)1.6480.6087621.451660.70617
NODDeveloping tillers at six leaf stage, 3rd internode1.198141.058012.084812.53521
CAR5Developing grain, bracts removed (5 DPA)0.7452352.163332.564681.08907
CAR15Developing grain, bracts removed (15 DPA)0.6272840.2113191.24181.00759



CDS Structure of MLOC_30535






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30535.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30535.1CUST_4337_PI427708083AvailableAvailablecontig_210619 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15020.2 -3 7e-12 65 26/41 (63%) 13101.m01663 protein lissencephaly type-1-like homology motif, putative, expressed
TAIR PP10None-----