MLOC_3051 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains04.25956.556330
LEAShoots from the seedlings (10 cm shoot stage)003.416680
INF1Young developing inflorescences (5mm)14.261712.15867.668990
INF2Developing inflorescences (1-1.5 cm)33.267212.278434.96840
ROORoots from the seedlings (10 cm shoot stage)4.326226.546847.165360
NODDeveloping tillers at six leaf stage, 3rd internode01.972535.693860
CAR5Developing grain, bracts removed (5 DPA)6.747871.922126.758510
CAR15Developing grain, bracts removed (15 DPA)3.76729000



CDS Structure of MLOC_3051






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367944
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367944CUST_25179_PI427708080NoneNoneNone
MLOC_20085.1NoneAvailableAvailablecontig_1587958 (Mapped)
MLOC_22748.1NoneAvailableNonecontig_161140 (Mapped)
MLOC_23273.1NoneAvailableNonecontig_16200 (Mapped)
MLOC_2420.2NoneAvailableNonecontig_1215070 (Not mapped)
MLOC_24572.1NoneAvailableNonecontig_1647934 (Mapped)
MLOC_27420.1NoneAvailableNonecontig_183056 (Not mapped)
MLOC_3051.1NoneAvailableNonecontig_1274195 (Not mapped)
MLOC_31617.1NoneAvailableNonecontig_2205597 (Not mapped)
MLOC_34277.1NoneAvailableNonecontig_2431736 (Not mapped)
MLOC_47594.1NoneAvailableNonecontig_308687 (Not mapped)
MLOC_48361.1NoneAvailableNonecontig_322117 (Mapped)
MLOC_62871.1NoneAvailableNonecontig_470503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----