MLOC_30508 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.637338.236375.963127.23687
LEAShoots from the seedlings (10 cm shoot stage)7.81246.797418.291336.58605
INF1Young developing inflorescences (5mm)6.748867.548298.059627.00778
INF2Developing inflorescences (1-1.5 cm)7.723469.422136.880829.84264
ROORoots from the seedlings (10 cm shoot stage)14.46818.023964.5495710.4286
NODDeveloping tillers at six leaf stage, 3rd internode3.248337.073634.6851219.5831
CAR5Developing grain, bracts removed (5 DPA)7.139847.649197.000887.75849
CAR15Developing grain, bracts removed (15 DPA)2.572493.199092.600167.04228



CDS Structure of MLOC_30508






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30508.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30508.1CUST_12023_PI427708083AvailableAvailablecontig_210375 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47550.1 -1 5e-43 154 83/129 (64%) 13105.m05041 protein ANTH/ENTH domain containing protein, putative, expressed
TAIR PP10 AT2G01600.1 -1 8e-40 144 70/82 (85%) ENTH/ANTH/VHS superfamily protein | chr2:268975-272356 FORWARD LENGTH=571