MLOC_30501 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6728661.213860.3845540
LEAShoots from the seedlings (10 cm shoot stage)3.527163.255082.512450
INF1Young developing inflorescences (5mm)2.034582.244422.239910
INF2Developing inflorescences (1-1.5 cm)2.533342.325162.290790
ROORoots from the seedlings (10 cm shoot stage)0.4254940.64873200
NODDeveloping tillers at six leaf stage, 3rd internode2.643143.475224.001610
CAR5Developing grain, bracts removed (5 DPA)0.6275531.597780.7297230
CAR15Developing grain, bracts removed (15 DPA)00.1820210.1367390



CDS Structure of MLOC_30501






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251184.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251184.1CUST_23413_PI427708080NoneNoneNone
MLOC_1300.1NoneAvailableAvailablecontig_111387 (Not mapped)
MLOC_28030.1NoneAvailableNonecontig_188432 (Mapped)
MLOC_28228.1NoneAvailableNonecontig_1901873 (Mapped)
MLOC_30501.1NoneAvailableNonecontig_210339 (Not mapped)
MLOC_74947.1NoneAvailableNonecontig_668236 (Not mapped)
MLOC_78727.1NoneAvailableNonecontig_816537 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----