MLOC_30447 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.277791.752474.354790
LEAShoots from the seedlings (10 cm shoot stage)5.952414.638897.166890
INF1Young developing inflorescences (5mm)3.898563.557054.717350
INF2Developing inflorescences (1-1.5 cm)3.531213.704393.759470
ROORoots from the seedlings (10 cm shoot stage)01.858262.356910
NODDeveloping tillers at six leaf stage, 3rd internode2.137356.810717.377640
CAR5Developing grain, bracts removed (5 DPA)2.910963.247216.098770
CAR15Developing grain, bracts removed (15 DPA)2.180630.9983440.9320120



CDS Structure of MLOC_30447






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355680
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355680CUST_19549_PI427708080NoneNoneNone
MLOC_1432.1NoneAvailableNonecontig_1124581 (Mapped)
MLOC_1721.1NoneAvailableNonecontig_115379 (Mapped)
MLOC_19654.2NoneAvailableAvailablecontig_158583 (Mapped)
MLOC_26414.1NoneAvailableNonecontig_1754257 (Not mapped)
MLOC_28399.1NoneAvailableNonecontig_1914539 (Mapped)
MLOC_28766.3NoneAvailableNonecontig_194588 (Mapped)
MLOC_30083.1NoneAvailableNonecontig_206337 (Not mapped)
MLOC_30447.1NoneAvailableNonecontig_2097934 (Not mapped)
MLOC_32423.1NoneAvailableNonecontig_2285024 (Not mapped)
MLOC_32474.1NoneAvailableNonecontig_2288934 (Not mapped)
MLOC_34292.1NoneAvailableNonecontig_2433807 (Not mapped)
MLOC_40540.1NoneAvailableNonecontig_2560861 (Mapped)
MLOC_41509.1NoneAvailableNonecontig_259207 (Mapped)
MLOC_43661.1NoneAvailableNonecontig_271927 (Mapped)
MLOC_45977.1NoneAvailableNonecontig_283829 (Not mapped)
MLOC_47343.1NoneAvailableNonecontig_304483 (Mapped)
MLOC_48137.1NoneAvailableNonecontig_318199 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----