- Predicted Gene MLOC_30372
MLOC_30372 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.0433186 | 0.0620553 | 0.0629226 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.223251 | 0.240255 | 0.211806 | 0.202294 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0424224 | 0 | 0.0444689 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0389342 | 0.0717817 | 0.0497512 | 0.0648046 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.194923 | 0 | 0.644162 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0338863 | 0.193094 | 0.0238779 | 0.519715 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.142232 | 0 | 0.0481355 | 0.112744 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_30372
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30372.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g52880.1 |
-1 |
1e-49 |
179 |
110/148 (74%) |
13103.m05768 protein BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| TAIR PP10 |
AT5G66560.1 |
-1 |
1e-17 |
85 |
58/145 (40%) |
Phototropic-responsive NPH3 family protein | chr5:26564368-26566662 FORWARD LENGTH=668 |