MLOC_30371 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2018490.1421540.291528
LEAShoots from the seedlings (10 cm shoot stage)0.66861700.1742840.408098
INF1Young developing inflorescences (5mm)0.173967000.162941
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.214390.09936210.06159790.31858
CAR5Developing grain, bracts removed (5 DPA)0.11003700.1068480.208392
CAR15Developing grain, bracts removed (15 DPA)000.1171080.243022



CDS Structure of MLOC_30371






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30371.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30371.1CUST_4319_PI427708083AvailableAvailablecontig_208869 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52880.1 -2 1e-15 51 25/35 (71%) 13103.m05768 protein BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
TAIR PP10None-----