MLOC_3036 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 62.6694 | 49.2229 | 52.958 | 50.0774 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 45.7392 | 8.40524 | 18.3763 | 18.9632 |
| INF1 | Young developing inflorescences (5mm) | 0.392931 | 0.652444 | 0.167445 | 0.361206 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.231051 | 0.291586 | 0.363482 | 0.30955 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 40.0326 | 35.2318 | 30.2263 | 35.4679 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 146.935 | 107.866 | 57.5272 | 232.433 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.9034 | 13.7526 | 13.1063 | 12.4821 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.86372 | 0.875194 | 2.72259 | 4.01137 |
CDS Structure of MLOC_3036
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3036.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g33550.1 |
+2 |
2e-85 |
265 |
158/207 (76%) |
13102.m03638 protein harpin-induced protein 1 domain containing protein, expressed |
| TAIR PP10 |
AT5G22200.1 |
+2 |
8e-46 |
160 |
75/134 (56%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr5:7355688-7356871 FORWARD LENGTH=210 |
