- Predicted Gene MLOC_30330
MLOC_30330 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.062436 | 0.188353 | 0.1728 | 0.121575 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.18116 | 0.0276585 | 0.120395 | 0.0913465 |
| INF1 | Young developing inflorescences (5mm) | 1.22682 | 1.22924 | 1.05891 | 0.840952 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.36823 | 1.34767 | 1.21375 | 1.20575 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0283773 | 0.185872 | 0.0485189 | 0.134679 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0496036 | 0.0493125 | 0.0533795 | 0.129544 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.03421 | 0.790856 | 1.08134 | 0.735238 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.154104 | 0.147036 | 0.246931 | 0.317905 |
CDS Structure of MLOC_30330
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30330.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g05940.1 |
+2 |
2e-171 |
533 |
313/419 (75%) |
13108.m00591 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT4G35800.1 |
+2 |
7e-142 |
480 |
300/424 (71%) |
| Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_II_LS | RNA polymerase II large subunit | chr4:16961115-16967892 REVERSE LENGTH=1839 |