MLOC_30326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.565563.398885.146724.94903
LEAShoots from the seedlings (10 cm shoot stage)0.9007450.5285372.736630.989888
INF1Young developing inflorescences (5mm)000.07200970.0488015
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)14.43738.907117.531039.31436
NODDeveloping tillers at six leaf stage, 3rd internode5.473451.791660.104633.34149
CAR5Developing grain, bracts removed (5 DPA)0.1395380.06583630.1398960.124033
CAR15Developing grain, bracts removed (15 DPA)0.6144750.7634950.5637441.50297



CDS Structure of MLOC_30326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30326.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368999NoneNoneNoneNone
MLOC_30326.1CUST_2106_PI427708080AvailableAvailablecontig_208409 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04340.1 +2 5e-49 165 75/120 (63%) 13108.m00411 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G32300.1 +2 7e-27 107 46/114 (40%) | Symbols: UCC1 | uclacyanin 1 | chr2:13722510-13723464 FORWARD LENGTH=261