- Predicted Gene MLOC_30312
MLOC_30312 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 46.8712 | 38.3092 | 39.6366 | 44.5423 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.6739 | 10.9985 | 14.1872 | 13.9986 |
| INF1 | Young developing inflorescences (5mm) | 65.9055 | 56.8393 | 56.306 | 57.6965 |
| INF2 | Developing inflorescences (1-1.5 cm) | 54.7658 | 44.4252 | 44.377 | 59.6961 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.5722 | 28.8992 | 35.1958 | 42.6448 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.17393 | 0.800022 | 3.17441 | 4.1586 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 49.5735 | 44.6099 | 45.795 | 52.2738 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 22.2323 | 18.9355 | 12.3648 | 49.4923 |
CDS Structure of MLOC_30312
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30312.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g42450.1 |
+1 |
4e-25 |
98 |
46/54 (85%) |
13107.m04437 protein ribosomal protein S2, putative, expressed |
| TAIR PP10 |
AT3G04770.2 |
+1 |
6e-22 |
88 |
39/54 (72%) |
| Symbols: RPSAb | 40s ribosomal protein SA B | chr3:1309544-1310846 REVERSE LENGTH=280 |