MLOC_30292 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.522156.586768.87418.31451
LEAShoots from the seedlings (10 cm shoot stage)9.668459.0622711.74449.94017
INF1Young developing inflorescences (5mm)10.779512.537315.735312.7936
INF2Developing inflorescences (1-1.5 cm)26.342522.830717.716528.262
ROORoots from the seedlings (10 cm shoot stage)4.796828.4132313.317612.2703
NODDeveloping tillers at six leaf stage, 3rd internode6.547110.477412.27137.597
CAR5Developing grain, bracts removed (5 DPA)10.58848.4958.8104610.5233
CAR15Developing grain, bracts removed (15 DPA)10.16738.138829.4888123.4939



CDS Structure of MLOC_30292






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30292.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30292.1CUST_12013_PI427708083AvailableAvailablecontig_208181 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47550.1 +1 4e-20 89 43/46 (93%) 13105.m05041 protein ANTH/ENTH domain containing protein, putative, expressed
TAIR PP10 AT2G01600.1 +1 2e-20 89 42/46 (91%) ENTH/ANTH/VHS superfamily protein | chr2:268975-272356 FORWARD LENGTH=571