MLOC_30262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.314970.08918950.3525690.256265
LEAShoots from the seedlings (10 cm shoot stage)0.1389390.8196151.331470.740162
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.7841241.031940.4810371.26531
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_30262






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_30262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_30262.1CUST_4305_PI427708083AvailableAvailablecontig_207817 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g37180.1 -1 1e-41 147 85/119 (71%) 13108.m03909 protein patatin, putative, expressed
TAIR PP10 AT4G37070.1 -1 4e-36 131 63/81 (78%) | Symbols: PLP1, PLA IVA, AtPLAIVA | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | chr4:17465167-17467058 REVERSE LENGTH=383