- Predicted Gene MLOC_30232
MLOC_30232 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_30232_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_30232_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.07361 | 11.0102 | 9.76144 | 8.8725 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.1602 | 9.04619 | 9.22419 | 8.65955 |
INF1 | Young developing inflorescences (5mm) | 15.4891 | 13.7982 | 15.202 | 11.4902 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.4352 | 17.7966 | 18.0508 | 18.6081 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.46586 | 7.86483 | 6.90718 | 8.31127 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.06035 | 7.55434 | 8.74749 | 25.9388 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.9904 | 13.7512 | 14.8811 | 13.4803 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.32885 | 3.74639 | 3.99476 | 8.38816 |
CDS Structure of MLOC_30232
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30232.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g02970.1 |
+1 |
0.0 |
2776 |
1409/1585 (89%) |
13103.m00273 protein Dicer, putative, expressed |
TAIR PP10 |
AT1G01040.2 |
+1 |
0.0 |
2394 |
1222/1634 (75%) |
| Symbols: DCL1 | dicer-like 1 | chr1:23519-31079 FORWARD LENGTH=1910 |