- Predicted Gene MLOC_30227
MLOC_30227 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.24472 | 1.42146 | 1.75229 | 1.06144 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 796.972 | 2294.51 | 2652.49 | 1130.62 |
| INF1 | Young developing inflorescences (5mm) | 0.0910385 | 0.538261 | 0.659542 | 0.235805 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.144195 | 0.604453 | 1.29061 | 0.430512 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.13579 | 0.672139 | 4.04518 | 0.916467 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 74.6067 | 73.427 | 148.873 | 197.803 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.017 | 48.2908 | 51.9107 | 30.386 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.28007 | 5.64382 | 4.33291 | 7.24207 |
CDS Structure of MLOC_30227
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_30227.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g19381.1 |
-1 |
9e-66 |
208 |
94/113 (83%) |
13112.m02058 protein ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G67090.1 |
-1 |
4e-56 |
183 |
82/112 (73%) |
| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180 |