MLOC_30173 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.9647400
LEAShoots from the seedlings (10 cm shoot stage)07.628773.179530
INF1Young developing inflorescences (5mm)14.03666.013534.997770
INF2Developing inflorescences (1-1.5 cm)1.5235.79224.217390
ROORoots from the seedlings (10 cm shoot stage)02.0859713.89670
NODDeveloping tillers at six leaf stage, 3rd internode3.471162.584983.759080
CAR5Developing grain, bracts removed (5 DPA)4.170811.8241610.91130
CAR15Developing grain, bracts removed (15 DPA)5.9577403.014580



CDS Structure of MLOC_30173






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355789
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355789CUST_14021_PI427708083NoneNoneNone
MLOC_29085.1NoneAvailableNonecontig_197326 (Mapped)
MLOC_30173.1NoneAvailableNonecontig_2071003 (Mapped)
MLOC_43210.1NoneAvailableNonecontig_26860 (Not mapped)
MLOC_46956.1NoneAvailableAvailablecontig_298397 (Not mapped)
MLOC_49958.2NoneAvailableNonecontig_351545 (Not mapped)
MLOC_61923.1NoneAvailableNonecontig_460007 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----