MLOC_3013 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.0776 | 11.7267 | 12.1661 | 12.1593 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2186 | 29.1194 | 25.1596 | 20.1277 |
| INF1 | Young developing inflorescences (5mm) | 4.12246 | 4.01208 | 5.04622 | 3.94112 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.1571 | 4.47243 | 10.4212 | 9.08276 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.9227 | 33.1372 | 32.4743 | 40.9802 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.4137 | 23.2124 | 43.1392 | 84.5277 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.59624 | 11.362 | 13.0239 | 12.1095 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.21244 | 4.77532 | 4.59128 | 13.6729 |
CDS Structure of MLOC_3013
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3013.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g39630.1 |
-3 |
0.0 |
592 |
308/350 (88%) |
13112.m04117 protein CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT4G33950.1 |
-3 |
0.0 |
539 |
257/319 (81%) |
| Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44, ATOST1 | Protein kinase superfamily protein | chr4:16272364-16274657 FORWARD LENGTH=362 |
