MLOC_30099 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.129361.908420.7389880
LEAShoots from the seedlings (10 cm shoot stage)00.4483140.7684670
INF1Young developing inflorescences (5mm)1.452122.625893.27350
INF2Developing inflorescences (1-1.5 cm)1.862433.596022.006940
ROORoots from the seedlings (10 cm shoot stage)1.459431.070214.140410
NODDeveloping tillers at six leaf stage, 3rd internode1.349222.517053.266470
CAR5Developing grain, bracts removed (5 DPA)0.476491.709683.222280
CAR15Developing grain, bracts removed (15 DPA)0.2761880.5752061.62410



CDS Structure of MLOC_30099






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249100.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249100.1CUST_13935_PI427708083NoneNoneNone
MLOC_27223.1NoneAvailableNonecontig_1815139 (Not mapped)
MLOC_30099.1NoneAvailableNonecontig_2064810 (Mapped)
MLOC_35688.2NoneAvailableNonecontig_251641 (Mapped)
MLOC_46574.2NoneAvailableAvailablecontig_292439 (Not mapped)
MLOC_8251.1NoneAvailableNonecontig_1417169 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----