MLOC_30083 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3938741.270271.704620
LEAShoots from the seedlings (10 cm shoot stage)01.016970.8216250
INF1Young developing inflorescences (5mm)1.307372.205422.041670
INF2Developing inflorescences (1-1.5 cm)2.34731.68620.8422790
ROORoots from the seedlings (10 cm shoot stage)0.3296260.5819681.269550
NODDeveloping tillers at six leaf stage, 3rd internode0.1587510.3118680.693170
CAR5Developing grain, bracts removed (5 DPA)0.9924880.714990.212620
CAR15Developing grain, bracts removed (15 DPA)0.5538750.3837220.2769840



CDS Structure of MLOC_30083






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355680
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355680CUST_19549_PI427708080NoneNoneNone
MLOC_1432.1NoneAvailableNonecontig_1124581 (Mapped)
MLOC_1721.1NoneAvailableNonecontig_115379 (Mapped)
MLOC_19654.2NoneAvailableAvailablecontig_158583 (Mapped)
MLOC_26414.1NoneAvailableNonecontig_1754257 (Not mapped)
MLOC_28399.1NoneAvailableNonecontig_1914539 (Mapped)
MLOC_28766.3NoneAvailableNonecontig_194588 (Mapped)
MLOC_30083.1NoneAvailableNonecontig_206337 (Not mapped)
MLOC_30447.1NoneAvailableNonecontig_2097934 (Not mapped)
MLOC_32423.1NoneAvailableNonecontig_2285024 (Not mapped)
MLOC_32474.1NoneAvailableNonecontig_2288934 (Not mapped)
MLOC_34292.1NoneAvailableNonecontig_2433807 (Not mapped)
MLOC_40540.1NoneAvailableNonecontig_2560861 (Mapped)
MLOC_41509.1NoneAvailableNonecontig_259207 (Mapped)
MLOC_43661.1NoneAvailableNonecontig_271927 (Mapped)
MLOC_45977.1NoneAvailableNonecontig_283829 (Not mapped)
MLOC_47343.1NoneAvailableNonecontig_304483 (Mapped)
MLOC_48137.1NoneAvailableNonecontig_318199 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----