MLOC_3006 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.971065.982545.230160
LEAShoots from the seedlings (10 cm shoot stage)3.485552.365822.862930
INF1Young developing inflorescences (5mm)13.065111.517310.67240
INF2Developing inflorescences (1-1.5 cm)20.760317.952311.67440
ROORoots from the seedlings (10 cm shoot stage)1.290545.894194.41820
NODDeveloping tillers at six leaf stage, 3rd internode1.218062.890032.676680
CAR5Developing grain, bracts removed (5 DPA)12.51429.155597.88430
CAR15Developing grain, bracts removed (15 DPA)3.970872.659823.784960



CDS Structure of MLOC_3006






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248932.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248932.1NoneNoneNoneNone
MLOC_24345.1NoneAvailableAvailablecontig_164306 (Mapped)
MLOC_28154.1NoneAvailableNonecontig_1895847 (Mapped)
MLOC_3006.1NoneAvailableNonecontig_126998 (Mapped)
MLOC_32115.1NoneAvailableNonecontig_2253409 (Not mapped)
MLOC_33270.1NoneAvailableNonecontig_23588 (Not mapped)
MLOC_35409.1NoneAvailableNonecontig_2482301 (Not mapped)
MLOC_41906.1NoneAvailableNonecontig_2613025 (Not mapped)
MLOC_46271.1NoneAvailableNonecontig_287850 (Mapped)
MLOC_46358.3NoneAvailableNonecontig_289080 (Mapped)
MLOC_47425.1NoneAvailableNonecontig_305974 (Not mapped)
MLOC_48300.1NoneAvailableNonecontig_320894 (Not mapped)
MLOC_76694.1NoneAvailableNonecontig_724178 (Not mapped)
MLOC_79350.1NoneAvailableNonecontig_84556 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----