MLOC_30049 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.373524.897615.368734.4143
LEAShoots from the seedlings (10 cm shoot stage)4.862727.301729.420364.72605
INF1Young developing inflorescences (5mm)0.7433021.434471.119740.748196
INF2Developing inflorescences (1-1.5 cm)0.7622791.600241.169771.10752
ROORoots from the seedlings (10 cm shoot stage)9.2371110.372611.10539.15806
NODDeveloping tillers at six leaf stage, 3rd internode7.658219.025713.3510519.0239
CAR5Developing grain, bracts removed (5 DPA)5.810238.036557.336225.64261
CAR15Developing grain, bracts removed (15 DPA)7.040157.057629.1092214.6463



CDS Structure of MLOC_30049






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK374526
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374526CUST_14396_PI427708083NoneNoneNone
MLOC_28282.1NoneAvailableNonecontig_1906210 (Not mapped)
MLOC_30049.1NoneAvailableAvailablecontig_205986 (Not mapped)
MLOC_47409.1NoneAvailableNonecontig_305531 (Mapped)
MLOC_49564.1NoneAvailableNonecontig_344037 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----