MLOC_30048 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.00995.039754.057574.64
LEAShoots from the seedlings (10 cm shoot stage)3.798563.434623.893613.15973
INF1Young developing inflorescences (5mm)8.221159.415728.084546.79548
INF2Developing inflorescences (1-1.5 cm)10.716211.51216.7638111.016
ROORoots from the seedlings (10 cm shoot stage)2.694854.528013.563314.97048
NODDeveloping tillers at six leaf stage, 3rd internode1.247532.629323.796449.43097
CAR5Developing grain, bracts removed (5 DPA)5.579716.728093.39185.09443
CAR15Developing grain, bracts removed (15 DPA)1.621441.696622.596534.16381



CDS Structure of MLOC_30048






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249789.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249789.1CUST_13946_PI427708083NoneNoneNone
MLOC_28950.1NoneAvailableNonecontig_1961744 (Not mapped)
MLOC_29180.1NoneAvailableNonecontig_198306 (Not mapped)
MLOC_30048.1NoneAvailableAvailablecontig_205984 (Mapped)
MLOC_32714.1NoneAvailableNonecontig_23140 (Not mapped)
MLOC_46139.1NoneAvailableNonecontig_286014 (Mapped)
MLOC_47528.1NoneAvailableNonecontig_307560 (Mapped)
MLOC_80321.1NoneAvailableNonecontig_897855 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----