MLOC_30030 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.322651.174310.8795930
LEAShoots from the seedlings (10 cm shoot stage)0.9990731.0564800
INF1Young developing inflorescences (5mm)01.671222.104440
INF2Developing inflorescences (1-1.5 cm)0.9557751.738510.640160
ROORoots from the seedlings (10 cm shoot stage)3.326890.59327700
NODDeveloping tillers at six leaf stage, 3rd internode0.4872111.593511.54740
CAR5Developing grain, bracts removed (5 DPA)0.5948341.61221.86750
CAR15Developing grain, bracts removed (15 DPA)0.596678000



CDS Structure of MLOC_30030






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356745
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356745CUST_23944_PI427708080NoneNoneNone
MLOC_24630.1NoneAvailableNonecontig_1649502 (Mapped)
MLOC_30030.1NoneAvailableNonecontig_2058131 (Mapped)
MLOC_48261.1NoneAvailableNonecontig_320324 (Mapped)
MLOC_79897.1NoneAvailableAvailablecontig_874766 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----