MLOC_29947 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)01.136621.884150
INF1Young developing inflorescences (5mm)0.5843881.203051.487690
INF2Developing inflorescences (1-1.5 cm)0.482449000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.75861400
CAR5Developing grain, bracts removed (5 DPA)1.2262300.6575330
CAR15Developing grain, bracts removed (15 DPA)000.8953910



CDS Structure of MLOC_29947






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358428
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358428CUST_19963_PI427708080NoneNoneNone
MLOC_13289.1NoneAvailableAvailablecontig_1565293 (Mapped)
MLOC_26727.1NoneAvailableNonecontig_1775807 (Mapped)
MLOC_29947.1NoneAvailableNonecontig_2051355 (Not mapped)
MLOC_47580.5NoneAvailableNonecontig_308485 (Mapped)
MLOC_48519.1NoneAvailableNonecontig_32511 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----